Songs [Illustrated] (With Active Table of Contents)
Data exported from Koe enable many more kinds of analyses in other software. From the unit features extracted by Koe , distributions of unit features could be plotted in R or Python and compared between groups. In Excel unusual syntax could be identified in the cSPADE table as one means of identifying potential classification errors.
Contact us via the contact form on the Koe website koe. Skip to content. Dismiss Document your code Every project on GitHub comes with a version-controlled wiki to give your documentation the high level of care it deserves. Sign up for free See pricing for teams and enterprises. Table of Contents Getting started Trying out the filter What is the overall unit diversity for male and female bellbirds across all seven sites?
Find the total number of classes Make a database subset for males Make a database subset for females Find how many classes are sung by males Find how many classes are sung by females Calculating repertoire overlap How many male unit types are now shared between Tawharanui and source population Hauturu? Sign in if you aren't already. Navigate to Manage your database.
Locate the zip file you downloaded in step 1. Click Open. Try it: Below, we use the filter to compare male and female unit diversity across the whole metapopulation, then between males at two sites. What is the overall unit diversity for male and female bellbirds across all seven sites? This reveals fine-scale classes in total: Now we want to see how many of the are sung by males, how many by females, and how many are shared between the sexes.
Click Make a Collection from selected units on the active controls pane. Type a unique name for the collection e. Click Set. Make a database subset for females Make a subset for units sung by females in exactly the same way: Replace the filter with sex:F to filter for all units sung by females. Select the checkbox header to select all filtered rows. Click Make a Collection from selected units Type a unique name for the collection e. Click on the Current database dropdown in the active controls pane. Select the male subset Collection you made.
The class count at the top left where the arrow is pointing shows there are fine-scale classes for males: Find how many classes are sung by females Repeat the process for the female subset. Here's another slightly more involved question: How many male unit types are now shared between Tawharanui and source population Hauturu?
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We will do this for males. In the resulting unit table, select all rows by clicking the checkbox header. Click Make a Collection from selected units on the controls pane. Select your collection for LBI males, whatever you named it. Click Export entire table csv on the active controls pane. Evaluating song structure in bellbirds Back to table of contents To help you analyse sequence structure in detail, Mine sequence structure view shows the strength of association between unit classes using the cSPADE algorithm Zaki, , and produces network visualisations.
Click on the Current database dropdown. Select your collection for TMI males, whatever you named it. Right-click the tab then click Duplicate from the dropdown menu the menu will look different in different browsers. Product description Product Description Late resounds the early strain; Weal and woe in song remain. Not Enabled. No customer reviews.
- Analysis Tutorial: Case Study of NZ bellbird song · fzyukio/koe Wiki · GitHub.
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Analysis Tutorial: Case Study of NZ bellbird song
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